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  • Author or Editor: William P. Davis x
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Fusarium wilt of basil (FOB), caused by Fusarium oxysporum f. sp. basilici, is an economically damaging disease of field- and greenhouse-grown sweet basil. Growers have observed a resurgence of FOB and susceptibility in FOB-resistant cultivars. Because currently available chemical, biological, and cultural control methods are costly, unsustainable, ineffective, or challenging to implement, new strategies of FOB control are needed. Cold plasma is becoming an increasingly important experimental technology in the food and agricultural industry for pathogen decontamination. To understand the effect of cold plasma treatment on FOB incidence and severity, experiments were conducted by treating FOB mycelium, inoculated sweet basil seedlings, and seeds with various experimental cold plasma treatment devices, all using helium as a feed gas. Initial results indicated that while the cold plasma jet treatment did not result in a significant reduction in mean mycelial growth rate or virulence of the pathogen, direct cold plasma jet treatments on seedlings, as well as a cold plasma dielectric barrier discharge treatment on seeds, did exhibit varying efficacies against FOB. Control of FOB appeared to be strongly dependent on the exposure time to cold plasma. These findings can aid in the standardization of a cold plasma treatment for the commercial basil seed and transplant industry.

Open Access

In this study, we report a simple procedure for developing and using new types of polymerase chain reaction (PCR) primers, named “high-frequency oligonucleotides–targeting active genes” (HFO-TAG). The HFO-TAG primers were constructed by first using a “practical extraction and report language” script to identify oligonucleotides (8, 9, and 10 bases) that exist in high frequency in 4700 expressed sequence tag (EST)-unigenes of watermelon (Citrullus lanatus) fruit. This computer-based screening yielded 3162 oligonucleotides that exist 32 to 335 times in the 4700 EST-unigenes. Of these, 192 HFO-TAG primers (found 51 to 269 times in the 4700 EST-unigenes) were used to amplify genomic DNA of four closely related watermelon cultivars (Allsweet, Crimson Sweet, Charleston Gray, and Dixielee). The average number of DNA fragments produced by a single HFO-TAG primer among these four watermelon cultivars was considerably higher (an average of 5.74 bands per primer) than the number of fragments produced by intersimple sequence repeat (ISSR) or randomly amplified polymorphic DNA (RAPD) primers (an average of 2.32 or 4.15 bands per primer, respectively). The HFO-TAG primers produced a higher number of polymorphic fragments (an average of 1.77 polymorphic fragments per primer) compared with the ISSR and RAPD primers (an average of 0.89 and 0.47 polymorphic fragments per primer, respectively). Amplification of genomic DNA from 12 watermelon cultivars and two U.S. Plant Introductions with the HFO-TAG primers produced a significantly higher number of fragments than RAPD primers. Also, in PCR experiments examining the ability of primers to amplify fragments from a watermelon cDNA library, the HFO-TAG primers produced considerably more fragments (an average of 6.44 fragments per primer) compared with ISSR and RAPD primers (an average of 3.59 and 2.49 fragments per primer, respectively). These results indicate that the HFO-TAG primers should be more effective than ISSR or RAPD primers in targeting active gene loci. The extensive EST database available for a large number of plant and animal species should be a useful source for developing HFO-TAG primers that can be used in genetic mapping and phylogenic studies of important crop plants and animal species.

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