Search Results
We report the detection of molecular markers linked to polygenic recessive resistance to cucumber mosaic virus (CMV) in pepper using distributional extreme analysis. A total of 132 mapped tomato genomic, cDNA, and pepper genomic clones from different linkage groups in two existing pepper maps, especially from the ones showing tentative CMVR QTLs, were selected as hybridization probes for Southern blots, in which DNA from the 12 most resistant and 15 most susceptible individuals from a large segregating F2 were probed. Several clones appeared to cosegregate with CMV resistance phenotype. Further analysis is being done to place these markers on existing molecular linkage maps. The precise locations of resistance genes can be defined by examining additional markers within the region. The availability of closely linked DNA markers may facilitate marker-aided selection in pepper CMV resistance breeding programs.
Genetic resistance to cucumber mosaic virus (CMV) in pepper (Capsicum spp.) is recessive, polygenic and, therefore, has been difficult to transfer in breeding programs. Although a few varieties have been released with some resistance, in our tests, these develop severe symptoms that are eventually indistinguishable from the susceptible reactions. Furthermore, accurate and consistent screens for the disease can be relatively difficult; therefore, we report on the detection molecular markers linked to two CMV resistance genes using distributional extreme analysis to identify the relevant quantitative trait loci (QTL). The 12 most resistant and 15 most susceptible individuals were selected from a segregating F2 population of 316 individuals that were derived from the interspecific cross (C. annuum `Jupiter' × C. frutescens BG2814-6). A total of 132 tomato genomic, cDNA, and pepper genomic clones were hybridized to filters with DNA extracted from the distributional extremes. These clones included framework markers representing all pepper linkage groups and also selected clones from regions of the genome identified in a preliminary analysis as possibly involved with CMV resistance. Several clones from the two regions of the genome previously identified appear to be nonrandomly cosegregating with the CMV resistance phenotype in this larger population. Further analysis will be done by adding more markers in the regions and refining the positions of the resistance QTL.
Pepper (Capsicum spp.) has the same basic chromosome number as tomato and other solanaceous plant species (2n = 2x = 24). By using the probes mostly from a tomato map, we have generated three molecular maps of pepper from interspecific F2 crosses of C. frutescens BG 2814-6, C. chinense PI 159234 and C. annuum `NuMex RNaky' with restriction fragment length polymorphisms, isozymes, random amplified polymorphic DNAs, and morphological traits. The best developed map is from C. annuum × C. chinense F2 cross, which currently has 366 markers covered 1081 cM in 18 linkage groups. Three linkage groups were assigned to three chromosomes based on primary trisomics. Several disease resistance genes including monogenic resistance to potyviruses and quantitative trait loci for resistance to tobacco mosaic virus and cucumber mosaic virus have been mapped. The distribution of allele frequency and marker segregation ratios have been analyzed. Chi-square analyses of all clones showed more skewing of segregation ratios in C. annuum × C. chinense population than the other two populations. The skewing occurs throughout the genome and tends towards heterozygote and one of the parents. The order of markers among three pepper maps will be compared and the comparisons of synteny between pepper and tomato maps will be described. A composite of three pepper maps will be presented using JoinMap software.