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Abscission of leaves, floral organs, and fruit is a developmentally and environmentally regulated process initiated in specialized thin layers of cells within abscission zones (AZs). Very little is known about early molecular events that drive abscission, especially of fruit. Commercial apple production relies on the use of flower and fruit abscission-promoting and -inhibiting compounds to enhance fruit quality, control preharvest fruit drop, and maintain consistent annual bearing. The success of chemical treatments is strongly influenced by numerous factors, including environment, genotype, developmental stage of the fruit, and physiological state of the tree. Toward developing improved strategies for regulating fruit abscission, we carried out transcriptional profiling of competent-quiescent and activated abscission layers. We found that a decisive event in the sequential process of abscission layer development is the transcriptional activation of the MdPEL1 gene, encoding a plant pectate lyase protein and potentially involved in the degradation of the middle lamella of adjacent abscission layer cells. Additionally, regulatory elements of at least 12 homologous pectate lyase genes in Arabidopsis thaliana were found to direct expression in floral AZs and in dehiscence zones along valve margins, suggesting that these genes have evolutionary conserved function. This work identifies a novel role for pectate lyases in plants. Furthermore, many abscission-related genes identified in this study are being used to track biochemical and regulatory pathways that participate in abscission in response to chemical treatments or environmental effects.
The nutritional and medicinal significance of jujube (Ziziphus jujuba) has led to persistent efforts in genomics to accelerate the utilization of its germplasm resources. However, the absence of accurate genetic identity of existing germplasm limits these studies. In the United States, different names were frequently given to the same jujube cultivars because the pedigrees of the imported germplasm are unclear. The present study selected a panel of 147 single nucleotide polymorphism (SNP) markers distributed across the jujube genome to examine genetic identity, genetic diversity, and population structure in 177 jujube cultivars sampled from different locations in the United States. SNP profile multilocus matching reported a total of 23 synonymous groups including 116 samples that were identical to at least one other sample. This led to the detection of 74 unique genotypes for subsequent diversity analysis. Model-based genetic structure analysis divided the distinctive genotypes into three major groups, with some admixtures among the groups. The genetic differentiation among these groups was further validated by analysis of molecular variance (Fst = 0.199, P value < 0.001), principal coordinate analysis, and clustering analysis. Morphological traits were studied in some of the genetically identical commercial cultivar groups, (i.e., Li, Lang, and Jinsi). Results demonstrated significant morphological differences within genetically identical cultivars in the Jinsi group, indicating phenotypic variation resulting from mutations in these clones.