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- Author or Editor: Bryan A. Connolly x
This study reports the development, characterization, and cross-species transferability of 20 genomic microsatellite markers for Aronia melanocarpa, an important nutraceutical fruit crop. The markers were developed with Illumina paired-end genomic sequencing technology using DNA from Professor Ed cultivar that was originally collected from the wild in New Hampshire. The markers were highly polymorphic and transferable to Aronia arbutifolia and Aronia prunifolia genomes. The average number of alleles per locus was 9.1, 4.5, and 5.6 for A. melanocarpa, A. arbutifolia, and A. prunifolia, respectively. The polymorphism information content (PIC) of loci ranged from 0.38 to 0.95 for all taxa, with an average of 0.80, 0.68, and 0.87 for A. melanocarpa, A. arbutifolia, and A. prunifolia, respectively. This is the first study to develop microsatellite markers in the Aronia genus. These markers will be very useful in studying the genetic diversity and population structure of wild Aronia and expediting the breeding efforts of this emerging fruit crop through marker-assisted selection.
Aronia Medik., commonly known as chokeberry, is a genus of deciduous, multistemmed, rosaceous shrubs native to eastern North America. Three species of chokeberry are commonly accepted, A. arbutifolia (L.) Pers., red chokeberry, A. melanocarpa (Michx.) Elliott, black chokeberry, and A. prunifolia (Marshall) Rehder, or purple chokeberry. In Europe, a fourth species of human origin is recognized as Aronia mitschurinii A.K.Skvortsov & Maitul. In North America this type of Aronia is described as cultivars of A. melanocarpa, including ‘Viking’, ‘Nero’, and ‘Aron’. This species is characterized by near homogeneity of the population, tetraploidy, and a distinct morphology with more robust stems, wider leaf blades, and larger fruits than wild populations of A. melanocarpa. It has been proposed that this genotype originated from Russian pomologist Ivan Michurin’s early 20th century experiments involving Aronia × Sorbus hybridization. In this study we used amplified fragment length polymorphic (AFLP) markers to elucidate the relationships of A. mitschurinii to wild North American Aronia, ×Sorbaronia C.K. Schneid, Sorbus L., and six additional genera from subtribe Pyrinae (Rosaceae). Data from seven primer combinations were interpreted by the NTSYSpc software package into a similarity matrix using Jaccard’s coefficient. Clustering of AFLP similarity data using the unweighted pair group method with arithmetic mean (UPGMA) identified A. mitschurinii as distinct from wild Aronia, grouping it close to ×Sorbaronia fallax C. K. Schneid. and ×Sorbaronia ‘Ivan’s Beauty’. Non-metric multidimensional scaling (nMDS) also demonstrated a relationship between A. mitschurinii, ×Sorbaronia fallax, a ×Sorbaronia × Aronia backcross and compound-leaved Sorbus.
The genus Aronia Medik., also known as chokeberry, is a group of deciduous shrubs in the Rosaceae family, subtribe Pyrinae. The four commonly accepted species include A. arbutifolia (L.) Pers., red chokeberry; A. melanocarpa (Michx.) Elliott, black chokeberry; A. prunifolia (Marshall) Reheder, purple chokeberry; and A. mitschurinii (A.K. Skvortsov & Maitul). Wild and domesticated Aronia species are found as diploids, triploids, and tetraploids. Genetic improvement of polyploid Aronia genotypes has been limited by suspected apomixis, which may be widespread or distinct to tetraploids. The objectives of this study were to elucidate the reproductive mechanisms of Aronia species and reveal the occurrence of apomixis within the genus and along ploidy lines. Twenty-nine Aronia accessions [five A. melanocarpa (2×), five A. melanocarpa (4×), eight A. prunifolia (3×), four A. prunifolia (4×), six A. arbutifolia (4×), and one A. mitschurinii (4×)] were used in this study. Intra-accession variability was evaluated by growing out progeny from each open-pollinated maternal accession and comparing plant phenotypes, ploidy levels, and amplified fragment length polymorphism (AFLP) marker profiles between the progeny and maternal accession. Progeny of diploid and tetraploid maternal plants had ploidy levels identical to maternal plants, except for UC009 (A. melanocarpa, 2×) which produced a mix of diploids and tetraploids. UC143 and UC149 (A. prunifolia, 3×) produced all triploid offspring, whereas all other triploid accessions produced offspring with variable ploidy levels including 2×, 3×, 4×, and 5×. Pentaploid Aronia has not been previously reported. Diploid accessions produced significant AFLP genetic variation (0.68–0.78 Jaccard’s similarity coefficient) in progeny, which is indicative of sexual reproduction. Seedlings from tetraploid accessions had very little AFLP genetic variation (0.93–0.98 Jaccard’s similarity coefficient) in comparison with their maternal accession. The very limited genetic variation suggests the occurrence of limited diplosporous apomixis with one round of meiotic division in tetraploid progeny. Triploid accessions appear to reproduce sexually or apomictically, or both, depending on the individual. These results support our understanding of Aronia reproductive mechanisms and will help guide future breeding efforts of polyploid Aronia species.