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- Author or Editor: James J. Luby x
Apple (Malus ×domestica Borkh.) breeding at the University of Minnesota (UMN) has been ongoing continuously since 1908 when staff originally planted thousands of seedlings from open-pollinated (OP) seeds collected from regional orchards. The first cultivar from the program, ‘Minnehaha’, was introduced in 1920 and several others from these OP seeds followed over the next 3 decades. Controlled crosses were initiated in 1916, and until the time of this publication, 28 cultivars have been introduced. Historical records of parentage, as recorded by staff in notebooks and in 20th-century publications, have been used to inform breeding decisions but might be incorrect as indicated by earlier explorations of parentage using simple sequence repeat (SSR) markers. Our objective was to elucidate parentage and extended pedigrees of all available cultivars introduced from the UMN apple breeding program using evaluations of Mendelian errors and shared haplotype length information based on data from single nucleotide polymorphism (SNP) arrays. Sixteen of the 21 cultivars introduced before ‘Honeycrisp’ (1991) had incorrect or incomplete pedigrees that are now at least partially elucidated. These include the two most important regional cultivars in the 20th century: ‘Haralson’ (parents: ‘Malinda’ and ‘Wealthy’) and ‘Fireside’ (parents: ‘Wealthy’ and ‘Northwest Greening’). ‘Wealthy’, a widely grown cultivar in the United States in the late 19th and early 20th centuries, was a frequent parent of older UMN cultivars. ‘Malinda’ was a less frequent parent than indicated by breeding records. ‘Duchess of Oldenburg’ (synonym ‘Borowitsky’) was revealed as an ancestor of overwhelming importance in the UMN breeding program. It was an ancestor of 27 of the 28 UMN cultivars, including as a parent of two cultivars, and a grandparent of 15 cultivars, including ‘Honeycrisp’.
We used microsatellite loci to investigate the parentage of the apple cultivar `Honeycrisp', a patented University of Minnesota introduction. In an attempt to find the correct parents, we also examined other apple varieties associated with the University of Minnesota apple breeding program. Based on written records from the 1960s, the presumed parents of `Honeycrisp' were `Honeygold' and `Macoun'. We were able to exclude both of these as parents, but found that `Keepsake' was consistent as one of the parents. A second potential parent could not be discovered. `Haralson', another commercially important cultivar from the University of Minnesota, is likely from a cross between `Malinda' and `Wealthy'.
Incidence and severity of fire blight [Erwinia amylovora (Burr.) Winslow, Broadhurst, Buchanan, Krumwiede, Rogers, and Smith] following field infection were recorded using families resulting primarily from open-pollination of Malus sylvestris (L.) Mill. var.domestica (Borkh.) Mansf. cultivars and a few other Malus Mill. sp. The families were structured as three sublines, planted in three successive years (1992 to 1994), of a diverse population of apple germplasm established at HortResearch, Hawkes Bay, New Zealand. The incidence of fire blight varied among the sublines with the oldest planting exhibiting more fire blight. Flowering trees were more likely to be infected than nonflowering trees, in terms of both incidence and severity. Furthermore, the level of fire blight was related to flowering date, with later flowering trees having higher levels. Thus, family means and narrow-sense heritability estimates were computed after first adjusting the fire blight score for flowering date by fitting a linear model. Provenance of origin of the maternal parent explained little variation except that M. sieversii Lebed. families were more resistant than M. sylvestris var. domestica families in one subline. Family means computed using all trees, and those from only flowering trees were highly correlated. Families from open-pollination of M. honanensis Rehder and M. xhartwiggii Koehne females were among the more susceptible. Those from several European M. sylvestris var. domestica cultivars as well as from M. baccata (L.) Borkh. and M. toringoides (Rehder) Hughes females were among the more resistant families. Narrow-sense heritability estimates ranged from 0.05 to 0.85 depending on the subline, with most estimates between 0.12 and 0.36. They were higher in the two older sublines that consisted primarily of open-pollinated families from M. sylvestris var. domestica, and lower in the younger subline that consisted primarily of M. sieversii, due to lower incidence and severity in the latter subline. Breeders who consider potential complications of juvenility, tree size, and flowering date in relation to infection periods should be able to exploit field epidemics to perform effective selection.
Consumer preferences for attributes of fresh peach fruit in the United States are largely unknown on a national basis. We used a choice experiment to explore market segmentation based on consumer heterogeneous preference for fruit attributes including external color, blemish, firmness, sweetness, flavor, and price. We collected the data using an online survey with 800 U.S. consumers. Using a latent class logit model, we identified three segments of consumers differing by different sets of preferred quality attributes: experience attribute-oriented consumers, who valued fruit quality (48.8% of the sample); search attribute-oriented consumers, who valued fruit appearance (33.7% of the sample); and balanced consumers, who considered search attributes and experience attributes but who valued each in a balanced way (17.5% of the sample). Each group demonstrated differentiated demographics and purchasing habits. The results have important marketing implications for peach breeders and suppliers.
Incorporating DNA-informed breeding techniques can improve selection efficiency for desired traits as compared with conventional breeding methods that do not use DNA-informed techniques. Incorporation of DNA technologies requires additional costs associated with reagents, equipment, and labor. To elucidate the cost-effectiveness of DNA-informed breeding in perennial crops with multiple years per generation, we conducted a cost–benefit analysis examining incorporation of marker-assisted selection (MAS), a type of DNA-informed breeding, applied to an apple breeding program. Annual operational costs for a midwest apple breeding program were used to develop a simulation with inputs including itemized costs and per unit costs for procedures at each breeding program stage. Simulations compared costs of MAS breeding techniques to conventional breeding methods to identify the break-even point (BEP) where cost-savings associated with MAS equals the accrued additional costs. Additional sensitivity analyses were conducted to examine changes in laboratory costs, seedling maintenance costs, and seedling evaluation costs. We found the BEP for this program occurs when MAS results in a removal rate of 13.18%, and changes to other costs (i.e., maintenance costs) result in a smaller percent decrease to the overall program budget. Our findings are useful to perennial crop breeding programs in which managers are considering incorporating DNA-informed breeding techniques.
Establishing marker-locus-trait associations to enable marker-assisted breeding depends on having an extensive, reliable database for phenotypic traits of interest in relevant germplasm. A reference germplasm set of 467 apple (Malus ×domestica Borkh.) cultivars, selections, and seedlings (referred to as individuals) was identified as part of the USDA-Specialty Crop Research Initiative (SCRI) project, RosBREED. The germplasm set provides efficient allelic representation of current parents in RosBREED demonstration apple breeding programs at Cornell University, Washington State University, and the University of Minnesota. Phenotyping at the three locations was conducted according to standardized protocols, focusing on fruit traits evaluated at harvest and after 10 and 20 weeks of refrigerated storage. Phenotypic data were collected for the sensory texture traits of firmness, crispness, and juiciness as well as for instrumental texture measures. In 2010 and 2011, fruit from 216 and 330 individuals, respectively, were harvested and a total of 369 individuals were evaluated over the two years. Correlations between sensory and instrumental texture measures were high in some instances. Moderate year-to-year repeatability of trait values was observed. Because each location had a largely unique set of individuals, as well as differing environmental conditions, means, ranges, and phenotypic variances differed greatly among locations for some traits. Loss of firmness and crispness during storage was more readily detected instrumentally than by the sensory evaluation.
The effects of growing and storage locations and storage temperature on soft scald incidence of `Honeycrisp' apples were examined. In 1999 and 2000, fruits were produced at five different locations, harvested at two different times, and stored at two or five different storage locations. In 1999, fruits were stored at 0 or 2 °C. Soft scald was only observed in fruits from one growing location and primarily at 0 °C. More soft scald was observed from the second harvest than from the first. Scalded fruits were preclimacteric as determined by ethylene production rate, whereas fruits from the other locations were postclimacteric. In 2000, fruits from four of the growing locations developed soft scald, and soft scald incidence was not related to ethylene production rate. Scalded fruits had higher concentrations of phosphorus, boron, and magnesium, and lower concentrations of manganese than unaffected fruit. Development of soft scald was not related to fruit ethylene production rates, was dependent on growing location, increased with later harvest, and may be related to fruit elemental content.
We conducted audience surveys at three major peach producer meetings across the United States. We found that the relative importance assigned to fruit quality and tree traits by producers varied across producers’ end markets. Fresh peach producers indicated fruit flavor and size were the most important fruit quality traits, whereas processed peach producers viewed fruit size, fruit firmness, and absence of split pits as being the most important traits for a successful peach cultivar. These results have potential to ensure that peach breeding programs are consonant with fresh and processed peach producers’ needs for fruit and tree traits.
Developing new cherry cultivars requires breeders to be aware of existing and emerging needs throughout the supply chain, from producer to consumer. Because breeding programs in perennial crop plants like sweet and tart cherries require both extended time and extensive resources, understanding and targeting priority traits is critical to improve the efficiency of breeding programs. This study investigated the relative importance of fruit and tree traits to sweet and tart cherry producers using ordered probit models. Tart cherry producers considered productivity and fruit firmness to be the most important traits, whereas sweet cherry producers regarded fruit size, fruit flavor, fruit firmness, freedom from pitting, and powdery mildew resistance as important traits. The location of producers’ orchards and their demographic backgrounds influenced their perceptions of the importance of traits. Our findings provide a quantitative basis to reinforce existing priorities of breeding programs or suggest new targets.