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- Author or Editor: Hongwen Huang x
Forty-eight kiwifruit cultivars and selections, representing more than 90% of total world kiwifruit production, were investigated using nine SSR markers to establish genetic identities, and evaluate genetic diversity and relatedness. These nine SSRs were polymorphic and a total of 213 alleles were detected, resulting in a mean number of 23.7 alleles per locus, ranging from nine to 38 alleles. One hundred and thirty-three alleles were found to be common to both A. chinensis and A. deliciosa, while 33 and 36 were specific to A. chinensis and A. deliciosa, respectively. In addition, 34 alleles were specific to one single genotype and provided a set of valuable alleles for cultivar identification. A single SSR locus UDK 96-414 could differentiate all 48 genotypes except two presumable clones. Mean number of alleles per locus (A), percentage of polymorphic loci (P), and direct count heterozygosity (Ho) assessed for each genotype over all loci revealed considerable differences among these 48 genotypes. On average, A = 2.6, P = 89.4% and Ho = 0.546 were found in A. chinensis cultivars, while A = 3.5, P = 97.0% and Ho = 0.671 in A. deliciosa cultivars. Consensus fingerprint profiling using SSR markers is a useful and reliable method for establishing genetic identities of kiwifruit cultivars and selections. It also improves evaluation effectiveness of genetic diversity and relatedness compared to RAPD markers.
Genetic variation among nine populations of Ozark chinkapin [Castanea pumila (L.) Mill. var. ozarkensis (Ashe) Tucker], threatened by their susceptibility to chestnut blight (Cryphonectria parasitica (Murrill) Barr), was investigated. Population genetic parameters estimated from isozyme variation suggest the populations have a higher genetic diversity (He = 0.227) than populations of the other Castanea Mill. species on the North American continent, the American chestnut (C. dentata (Marsh.) Borkh.) High levels of heterozygosity were detected within the populations, but nonsignificant differences in genetic diversity were observed among the different populations. Principal component analysis based on isozyme allele frequencies or randomly amplified polymorphic DNA phenotype frequencies showed clustering of the same populations. Populations with high levels of genetic diversity and unusual alleles should be the focal point of conservation biologists for capturing much of the genetic variation of the species.
Allozyme polymorphism in chestnut (Castanea) species was investigated using isoelectric focusing in thin-layer polyacrylamide slab gels. Genetic analysis of the progenies of intraspecific crosses and interspecific F2s and backcrosses (BC1s) allowed the verification of 11 polymorphic isozyme loci from 11 enzyme systems. The following loci were defined: Acp, Adh, Est-1, Est-2, Est-5, Me, Prx-1, Prx-2, Prx-3, Skd-3, and Skd-4. All polymorphic loci behaved as single-locus Mendelian genes. Skd showed unique species specificity. Skd-1 and Skd-2 were unique to the American chestnut (C. dentata Borkh.) and the European chestnut (C. sativa Mill.), whereas Skd-3 and Skd-4 were unique to the Chinese chestnut (C. mollissima Bl.) and the Japanese chestnut (C. crenata Sieb.). Linkage analysis revealed linkage for three pairs of loci: Skd-3/Skd-4, Est-1/Est-2, and Est-5/Prx-1. The single-tree progeny method was used successfully for isozyme genetic analysis. Forty-seven chestnut cultivars in six chestnut species were characterized using 12 isozyme loci and can be unambiguously identified by 12 multi-locus genotypes. The interspecific and geographic relationships among species were also discussed.
Linkage relations among eight isozyme genes, Acp-3, Est-1, Est-5, Prx-1, Prx-2, Prx-3, Me and Adh, and two morphological markers, Inh, and Twh, were investigated in one F2 and two BC1 families of interspecific crosses between the American chestnut (Castanea dentata) and the Chinese chestnut (C. mollissima). Inh was found to be consistently linked with Prx-1 and Est-5 in all families. The order of these three genes was determined to be-Ihn--Prx1--Est5. In addition, four other gene pairs, Acp3--Inh, Acp3--Prx1, Me--Inh and Twh--Inh were found to be linked in one of the three families investigated. The four isozyme genes and two morphological marker genes were tentatively integrated into one linkage group with the following gene order Acp3--Me--Twh--Inh--Prx1-Est5. This study demonstrated that isozyme genes can be integrated with morphological marker genes into a single linkage map without the need for additional crosses.
The genetic diversity within and between geographic populations of the American chestnut tree was evaluated with allozyme and RAPD markers. Winter dormant or mature shoot buds from American chestnut trees collected in Alabama, Georgia, North Carolina, Virginia, Pennsylvania, Ohio, Michigan, and Connecticut were used for isozyme assays. Genetic diversity statistics calculated for 20 isozyme loci indicated that the highest level of heterozygosity was detected in the Alabama and Connecticut populations, the lowest level in the Great Smoky Mountain populations. RAPD analyses were conducted on American chestnut plant material. The best results were obtained with seed tissue. Seed from New York, Virginia, and Pennsylvania populations and buds from Alabama and Georgia populations were evaluated for RAPD markers scattered throughout the chestnut genome.
'Jintao' is a new yellow-fleshed kiwifruit (Actinidia chinensis Planch) developed from the breeding program at the Wuhan Institute of Botany (WIB), in Wuhan, Hubei, People's Republic of China. 'Jintao' is a midseason cultivar that ripens three to four weeks before the standard commercial cultivar [A. deliciosa (A. Chev.) C.F. Liang et A.R. Ferguson] 'Hayward'. It is sweeter than 'Hayward' and has a smooth skin. 'Jintao' was selected from A. chinensis and offers growers in warmer climates an alternative to 'Hayward', because of its higher productivity, better fruit quality, and improved heat tolerance. 'Jintao', which means golden peach in Chinese, is named in recognition of its yellow flesh and the common Chinese name, Mihou-tao, or monkey peach.
Kentucky State Univ. (KSU) is the national clonal germplasm repository for Asimina species. Previous evaluation of the KSU pawpaw collection using 24 isozyme markers demonstrated that pawpaw has a relatively higher genetic diversity than that noted for other plant species with similar species characteristics (long-lived, woody, perennial, out-crossing, temperate, widespread, etc.). Current evaluation using RAPD markers will provide us with a more-accurate insight into pawpaw genetic diversity and population structure. In a preliminary experiment, one hundred 10-mer primers (OA1-20 through OE1-20, Operon Technologies Inc.) were screened against 32 commercial cultivars or advanced selections. A subset of 24 primers that amplify only the most-informative markers were used for germplasm evaluation. Sixty-eight RAPD markers were identified and used for determining genetic parameters. One-hundred-twenty pawpaw accessions were sampled from the KSU repository for RAPD analysis. These accessions represented nine widely distributed states within pawpaw's native range. RAPD data were subjected to various analyses using the NTSYS-PC computer program (ver. 1.8). Information generated from isozyme and RAPD markers will be used to formulate future germplasm collection strategies from wild populations within the native range. The implications of such information to the genetic enhancement of our repository and establishment of a core collection will be discussed.