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Carmina Gisbert, Judith M. Dumm, Jaime Prohens, Santiago Vilanova, and John R. Stommel

markers were selected for their high degree of polymorphism in an eggplant collection ( Vilanova et al., 2012 ). Full details on the SSR repeated sequence, primers sequence, and annealing temperature can be consulted in Vilanova et al. (2012) . For ‘Black

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Aliya Momotaz, Jay W. Scott, and David J. Schuster

cleaved amplified polymorphic markers (CAPs), sequence characterized amplified region (SCAR) markers, conserved orthologous sequence (COS), conserved orthologous sequence II (COSII) that were designed from public sequences available at Sol Genomics Network

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Xiaoxu Yang, Chang Liu, Zhishan Yan, Youjun Fan, Guojun Feng, and Dajun Liu

operates under long days ( Doust et al., 2017 ). RNA-seq technology facilitates the discernment of novel perspectives in transcriptome sequence analysis by providing comprehensive coverage of transcripts. In addition, RNA-seq could be used as an alternative

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Haejeen Bang, Angela R. Davis, Sunggil Kim, Daniel I. Leskovar, and Stephen R. King

yellow and a cleaved amplified polymorphic sequence (CAPS) marker was developed based on a single-nucleotide polymorphism (SNP) within the LCYB gene; the resultant CAPS marker has been used to reliably distinguish canary yellow from red flesh in numerous

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Lijing Zhou, David L. Creech, Ken W. Krauss, Yin Yunlong, and David L. Kulhavy

indicated that BC and PC are genetically nearer, whereas T302 is genetically closer to BC. Yu et al. (2009) completed the identification of Taxodium hybrids by sequence-related amplified polymorphism (SRAP) analysis. In this study, the authenticity of 4

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Jennifer Moore-Kucera, Anita Nina Azarenko, Lisa Brutcher, Annie Chozinski, David D. Myrold, and Russell Ingham

reaction to be monitored. From this information, the original number of copies of the target gene or sequence can be calculated ( Fierer et al., 2005 , Okano et al., 2004 ). Terminal restriction fragment length polymorphism can then be performed on the

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Shanthanu Krishna Kumar, Nathan Wojtyna, Laura Dougherty, Kenong Xu, and Gregory Peck

-100; Thermo Fisher Scientific) ( Doyle and Doyle, 1987 ). A spectrophotometer (NanoDrop 1000; Thermo Fisher Scientific) was used for DNA quantification. A cleaved amplified polymorphic sequence marker (CAPS 1455 ) targeting base 1455 in the open reading

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Nan Wang, Shi Liu, Peng Gao, Feishi Luan, and Angela R. Davis

-leaf-specific protein 8 ), the reference gene ( Kong et al., 2014 ) and specific primers were designed using the Premier 6.0 Software based on Grassi et al. (2013) . The primer sequences, amplicon sizes, and accession numbers are shown in Table 1 . The transcript