We determined variance components and narrow-sense heritability estimates for total and individual anthocyanin (ACY) content and antioxidant activity (AA) in fruit from 411 genotypes in a red raspberry (Rubus idaeus L.) factorial mating design based on 42 full-sib families derived from seven female and six male parents, harvested in 2002 and 2003. Within half-sib family total ACY content ranged from ≈1-60+ mg/100 g fruit in both seasons. The four major ACYs quantified by high-performance liquid chromatography also showed wide ranges each year. Female and male parent contributions to variation in total and individual ACYs were significant (P ≤ 0.001) in combined year analysis, and together accounted for 29% to 48% of the total variation. A substantial proportion of the female contribution was attributed to the use of a pigment-deficient R. parvifolius L. × R. idaeus hybrid derivative as a female parent. Female × male interaction was nonsignificant and contributed negligibly to total variance. Year effects accounted for <2.5% of variation in ACYs and were only marginally significant. Year interactions were negligible. Within family variation (among plots and within plot) accounted for ≈50% of the variation in total ACY and 62% to 69% of the variation in individual ACYs. Combined year narrow-sense heritability estimates were high (h 2 = 0.54-0.90 for individual ACYs, 1.00 for total ACY) among all factorial genotypes, but moderate when the progeny of the R. parvifolius derivative were excluded (h 2 = 0.45-0.78 for individual ACYs, 0.74 for total ACY). The latter estimates are applicable to breeding programs in which pigment-deficient genotypes are rarely or never used in breeding. Parental main effects were significant for AA, together accounting for 19% of total variance; female × male interaction was nonsignificant. Year effects were marginally significant and year interactions nonsignificant; together these sources of variation contributed <2% of total variation in AA. The majority of AA variation was found within- and among-plots within family. The phenotypic correlation between AA and total ACY was r = 0.53, and ranged from r = 0.21-0.46 between AA and individual ACYs; genetic correlations between AA and the ACYs were similar to the phenotypic correlations, suggesting predominantly additive genetic effects accounted for the phenotypic correlations. Linear modelling for AA based on individual ACYs and their interactions explained ≈0.53 of AA variation, substantially less than that explained by total phenolic content (R 2 = 0.88). Our results show substantial variation and moderate to high narrow-sense heritability estimates for red raspberry ACYs, but ACY content and profile information are ineffective proxies and predictors for AA in red raspberry fruit.
Ann Marie Connor, Tony K. McGhie, M. Joseph Stephens, Harvey K. Hall, and Peter A. Alspach
Ann Marie Connor, M. Joseph Stephens, Harvey K. Hall, and Peter A. Alspach
Variance components and narrow-sense heritabilities were estimated for antioxidant activity (AA), total phenolic content (TPH), and fruit weight in red raspberry (Rubus idaeus L.) fruit from offspring of a factorial mating design. Forty-two full-sib families utilizing seven female and six male parents were evaluated in each of two years in Motueka, New Zealand. In a single year, values within individual half-sib families ranged as widely as 25.3-79.4 μg·g-1 fruit for AA, 205-597 mg/100 g fruit for TPH, and 1.06-7.69 g for fruit weight. Analyses of variance for these three variates demonstrated significant parental source variation in both individual and combined year analyses. For AA and TPH, female parental effects accounted for ≈7% to 19% of total variation, while male effects accounted for ≈6% to 8%. A partially pigment deficient R. parvifolius L. derivative female parent accounted for some of these differences. Female × male parent interaction was not significant for AA and TPH and was marginally significant for fruit weight in combined year analysis. Year had a significant effect on the overall mean AA and TPH, but contributed less than genetic effects to the overall variation in all three traits. Interactions of year with genetic effects were not statistically significant for AA or TPH, indicating that between-year rank or scale changes among families were negligible. The largest proportion of variation was found within rather than among full-sib families. However, variation among plots within full-sib families accounted for 12% to 19% of total variation, indicating environmental differences accounted for some of the observed within-family variation in AA and TPH. Antioxidant activity and TPH were highly phenotypically correlated (r = 0.93); their genetic correlation (r = 0.59) implies that substantial additive genetic factors underlie the phenotypic correlation, but that nonadditive genetic or environmental influences are also important. Both AA and TPH were weakly negatively phenotypically correlated with fruit weight (r = -0.34 and -0.33, respectively), but the corresponding genetic correlations were close to zero. Thus, selection for both high AA or TPH and high fruit weight is possible. Narrow-sense heritability estimates based on variance components from combined year data were h 2 = 0.54, 0.48, and 0.77 for AA, TPH, and fruit weight, respectively. These estimates imply a rapid response to selection is possible.
John R. Stommel
the F 1 hybrid exceeded that of the high seed parent in this cross and reduced seed count progeny were over-represented in the F 2 generation. In related Solanaceous crops, production of seedless parthenocarpic fruit is heritable but does not fit a
H.M. Ariyarathne, D.P. Coyne, A.K. Vidaver, and K. Eskridge
The inheritance and heritability (H) of leaf and pods reactions and seed infection of common beans (Phaseolus vulgaris L.) to Xanthomonas campestris pv. phaseoli (Smith) Dye (Xcp) were studied in three crosses along with flower and stem color, and the association of reactions to Xcp in the plant organs. Recombinant inbred lines from the crosses `PC 50' × XAN 159, BAC 6 × HT 7719, and BelNeb 1 × A 55 were used. Quantitative inheritance patterns were observed for disease reactions in leaves, pods, and seeds. Stem and flower color were inherited qualitatively. Low to intermediate and intermediate H estimates were found for pod reactions when inoculated on the same time, allowing the infection to occur in a uniform environment. Intermediate to high H estimates were found for leaf and seed reactions to Xcp, respectively. Significant positive intermediate to moderately high correlations were found between the reactions to Xcp of the first trifoliolate with later-developed leaves and pods in all three populations. The moderately high genetic correlations between leaves and pods suggested that some common genes may control the reactions to Xcp in these plant organs. No association was detected between flower or stem color and reactions to Xcp.
John R. Stommel, Judith A. Abbott*, David Francis, and Mary J. Camp
Tomato fruit firmness is a key quality component of tomatoes produced for processing applications. Fruit firmness is generally considered a quantitatively inherited trait. Pericarp firmness of modern tomato cultivars is believed to be derived from a fairly narrow genetic background and is the result of the cumulative effort of numerous breeders over many years. Despite inferior phenotypes, wild species contain loci that can substantially increase tomato fruit quality. In the current study, inheritance of fruit firmness in firm and ultra-firm processing tomato germplasm developed from transgressive segregants of interspecific Lycopersicon esculentum × L. hirsutum and intraspecific L. esculentum crosses was characterized. Large-fruited breeding lines that varied in fruit firmness from soft to firm were identified for genetic analyses. A six-parent diallel of these advanced breeding lines was developed for field trials over multiple locations. Fruit firmness in the resulting 36 lines was determined by measuring fruit elastic properties during fruit puncture and compression. Following loading for compression, stress relaxation was recorded for 15 s. A three-parameter model was used to fit the relaxation curves. There was little correlation between firmness (maximum force) and the three relaxation parameters, i.e., firmness measured the elastic component and the relaxation parameters measured the viscous portions of the texture. General and specific combining ability for firmness derived from the respective genetic backgrounds was determined. Genetic variance components for fruit firmness were estimated using a diallel analysis and narrow sense heritability was measured using parent-offspring regression.
John R. Stommel
Genetic characterization of anthracnose resistance in tomato (Lycopersicon esculentum Mill.) caused by Colletotrichum coccodes (Wallr.) Hughes was accomplished using populations developed from crosses between the anthracnose susceptible cultivar US28 and three resistant breeding lines (115-4, 625-3, and 88B147) that varied in their degree of anthracnose resistance and relative stage of adaptation for commercial use. These lines were of common parental lineage with resistance derived from the small-fruited L. esculentum USDA PI 272636. Anthracnose lesion diameters and fruit weight were measured in puncture inoculated fruit of parental, F1, F2, and backcross generations within each cross. Correlation coefficients between fruit size and lesion diameter were low and generally nonsignificant. Estimates of broad and narrow sense heritabilities for resistance were moderate and declined as relative anthracnose susceptibility of the resistant parent increased coincident with increasing horticultural adaptation. A simple additive dominance model, m[d][h], was adequate to explain the genetic variance for anthracnose resistance in all crosses. Genetic variance for anthracnose resistance was primarily additive. The minimum number of effective factors or loci conditioning anthracnose resistance declined during attempts to transfer high levels of resistance from PI 272636 into adapted breeding lines.
Kimberly J. Walters, George L. Hosfield, Mark A. Uebersax, and James D. Kelly
Three populations of navy bean (Phaseolus vulgaris L.), consisting of recombinant inbred lines, were grown at two locations for 2 years and were used to study canning quality. The traits measured included visual appeal (VIS), texture (TXT), and washed drained mass (WDM). Genotype mean squares were significant for all three traits across populations, although location and year mean squares were higher. We found a positive correlation (r = 0.19 to 0.66) between VIS and TXT and a negative correlation (r = -0.26 to -0.66) between VIS and WDM and between TXT and WDM (r = -0.53 to -0.83) in all three populations. Heritability estimates were calculated for VIS, TXT, and WDM, and these values were moderate to high (0.48 to 0.78). Random amplified polymorphic DNA markers associated with quantitative trait loci (QTL) for the same canning quality traits were identified and studied in each population. Marker-QTL associations were established using the general linear models procedure with significance set at P=0.05. Location and population specificity was common among the marker-QTL associations identified. Coefficient of determination (R2) values for groups of markers used in multiple regression analyses ranged from 0.2 to 0.52 for VIS, 0.11 to 0.38 for TXT, and 0.25 to 0.38 for WDM. Markers were identified that were associated with multiple traits and those associations supported correlations between phenotypic traits. MAS would offer no advantage over phenotypic selection for the improvement of negatively associated traits.
Iwan F. Labuschagné, J.H. Louw, Karin Schmidt, and Annalene Sadie
Genetic variation in chilling requirement was investigated over three growth periods using clonal progenies of six apple [Malus sylvestris (L.) Mill. var. domestica (Borkh.) Mansf.] families derived from crosses of high and low chill requiring cultivars. Two quantitative measurements related to chilling requirement, viz., the time of initial budbreak (vegetative and reproductive) and the number of breaking buds over a specified time interval, were used as evaluation criteria. Genetic and environmental variances of the traits are presented as intra-class correlation coefficients for clones within and between families. For budbreak time, reproductive and vegetative, broad-sense heritability averaged around 75% and 69% respectively, indicating a high degree of genetic determination in this material. For budbreak number, moderate to low genetic determination was found with broad-sense heritabilities around 30%. Estimates of genetic components of variance between families were generally very low in comparison to the variance within families and predict potentially favorable responses to truncation selection on the traits within these progeny groups. Analysis of the data showed that distribution of budbreak time is typical of quantitative traits with means distributed closely around midparent values. Skewed distributions towards low budbreak number were obtained in varying degrees in all families.
Richard H. Ozminkowski Jr., Randolph G. Gardner, Robert H. Moll, and Warren R. Henderson
Prostrate growth habit (PGH) in tomato (Lycopersicon esculentum Mill.) lines derived from breeding material developed at the Agriculture Canada Research Station, Beaverlodge, Alberta, was the subject of a quantitative inheritance study. Plants with PGH have an increased lateral branch angle, relative to upright plants, and crown-set fruit supported above the soil surface making hand harvest easier. Genetic parameters were estimated in two families (20G and 53G), each containing PGH and upright-habit parental lines, F1, F2, and backcrosses to each parent. Field-grown plants were subjectively rated twice during the growing season. Broad-sense heritability of PGH in family 20G was estimated to be 0.65 and 0.71 for ratings of plant growth habit 6 and 9 weeks after transplanting, respectively, and 0.71 and 0.68 for those of family 53G. Narrow-sense heritability was estimated to be 0.83 and 1.05 for the two ratings in the 20G family and 0.77 and 0.78 in the 53G family. F1 and F2 means were not different from mid-parent values. The genetic variance was entirely additive and expression was influenced by the environment. The data did not support the hypothesis that PGH was controlled by a single gene.
P.D. Griffiths and J.W. Scott
Tomato mottle virus (ToMoV) is a silverleaf whitefly (Bemisia argentifolii Bellows and Perring n. sp.) transmitted, bipartite geminivirus that infects tomatoes (Lycopersicon esculentum Mill.). Inbred lines resistant to ToMoV were derived from Lycopersicon chilense Dunal accession LA 1932. Inheritance was studied using a family developed from the crossing of a resistant inbred with a susceptible tomato inbred over two seasons. The F1 had resistance intermediate to the parents and generation means analysis of F1 and F2, backcross and parental populations suggested that the action of at least two additive genes with high heritability (h2 n.s. = 0.87) controlled ToMoV resistance. When data from the two seasons were combined, an acceptable fit to an additive-dominance genetic model was obtained. Single plant comparisons, bulk comparisons, and tailends of F2 populations segregating for ToMoV resistance derived from LA 1932 identified randomly amplified polymorphic DNA (RAPD) markers using eight hundred 10-mer oligonucleotide primers. The F2 populations used for inheritance studies were screened for polymorphic markers, and 12 RAPD markers associated with the ToMoV resistant line were linked to the morphological markers self-pruning (sp) and potato leaf (c) on chromosome 6. RAPD markers that were associated with ToMoV resistance segregated into two linked regions flanking either side of the sp and c loci. The molecular studies suggested that the action of at least two additive regions controlled ToMoV resistance which supported the inheritance analysis.