Cranberry production involves the use of flooding for several purposes during the growing season, including pest control, winter protection, and harvest. The effect of the dissolved oxygen concentration in floodwater on carbohydrate concentration of uprights and roots during flooding was investigated using potted `Stevens' cranberry (Vaccinium macrocarpon Ait.) vines. Pots were placed in large bins filled with water to simulate a spring pest control flood (called late water) over a 21-day period. Two treatments were applied: oxygenated and nonoxygenated (control). Uprights and roots were collected every 3 days and prepared for HPLC analysis to quantify nonstructural carbohydrate concentration. Soluble sugar (sucrose, glucose, and fructose) and starch concentration, as well as total nonstructural carbohydrate (TNSC) concentration, decreased over the 3-week period in uprights but not roots regardless of treatment. Interestingly, the sucrose, glucose, fructose, and starch concentrations of uprights in the oxygenated treatment were lower than those of uprights in the control treatment throughout the experiment. This research indicates that vines in flooded bogs demonstrate a net carbon loss, resulting in reduced carbohydrate concentration available for growth and fruit production.