Eighteen peach rootstock cultivars, most of Prunus persica (L.) Batsch, were screened for diagnostic random amplified polymorphic DNA (RAPD) markers using synthetic decamer oligonucleotide primers. Twenty of the 80 primers were informative, and 40 amplified DNA bands from the informative primers were selected as RAPD markers. Based on combined banding patterns, all 18 rootstock cultivars were identified with only six of the 20 informative primers. Cluster analysis of the 18 peach rootstock cultivars using 40 RAPD markers produced a dendrogram of genetic relatedness in good agreement with their putative pedigrees. The first major bifurcation in the dendrogram divided these rootstock cultivars into two groups according to their resistance or susceptibility to root-knot nematodes [Meloidogyne incognita (Kofoid and White) Chitwood and M. javanica (Treub) Chitwood].